Basic Information
Locus ID:
nbisL1-mrna-22414
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 1660978 | 1668570 | - | nbisL1-mrna-22414 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 119,154.35 Da | 46.82 | 83.17 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00307 | Calponin homology (CH) domain | 43 | 141 | 1.3E-5 | IPR001715 |
| Pfam | PF00225 | Kinesin motor domain | 460 | 781 | 2.8E-103 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 454 | 820 | 3.04E-119 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 42 | 140 | 2.36E-12 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 395 | 783 | 1.0E-128 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 37 | 145 | 7.6E-11 | IPR036872 |
| SMART | SM00129 | kinesin_4 | 452 | 790 | 5.0E-158 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 39 | 142 | 14.528097 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 454 | 782 | 111.521126 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 682 | 693 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 732 | 753 | 3.1E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 683 | 701 | 3.1E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 652 | 669 | 3.1E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 529 | 550 | 3.1E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 980 | 994 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 997 | 1013 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1015 | 1068 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 980 | 1068 | - | - |
| Coils | Coil | Coil | 296 | 316 | - | - |
| Coils | Coil | Coil | 385 | 405 | - | - |
| Coils | Coil | Coil | 789 | 826 | - | - |
| Coils | Coil | Coil | 328 | 348 | - | - |
| Coils | Coil | Coil | 233 | 253 | - | - |
| Coils | Coil | Coil | 268 | 288 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_024446853.2 | kinesin-like protein KIN-14J isoform X1 [Populus trichocarpa] | 0 |
| B3H6Z8 | Kinesin-like protein KIN-14J OS=Arabidopsis thaliana OX=3702 GN=KIN14J PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JHT8 | Uncharacterized protein MANES_02G021900 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology