Basic Information
Locus ID:
nbisL1-mrna-22404
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 1561363 | 1563264 | + | nbisL1-mrna-22404 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.09 | 52,221.50 Da | 41.27 | 82.68 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 29 | 106 | 1.28782E-20 | - |
| Pfam | PF02214 | BTB/POZ domain | 29 | 115 | 2.1E-13 | IPR003131 |
| SUPERFAMILY | SSF54695 | POZ domain | 26 | 114 | 1.88E-15 | IPR011333 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 131 | 368 | 4.76E-10 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 140 | 480 | 2.2E-8 | IPR015943 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 19 | 125 | 2.1E-18 | IPR011333 |
| SMART | SM00225 | BTB_4 | 27 | 123 | 3.6E-7 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 27 | 91 | 8.792895 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_021668320.1 | BTB/POZ domain-containing protein At5g41330-like [Hevea brasiliensis] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2J5L7 | Potassium channel tetramerization domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology