Basic Information
Locus ID:
nbisL1-mrna-224
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001172F_pilon | 1311620 | 1327182 | - | nbisL1-mrna-224 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 204,532.55 Da | 44.83 | 98.48 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52058 | L domain-like | 1275 | 1666 | 5.78E-12 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 418 | 669 | 1.73E-9 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 4 | 290 | 1.9E-9 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1122 | 1358 | 9.81E-16 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 687 | 965 | 1.73E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 584 | 767 | 9.3E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 992 | 1171 | 1.7E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 286 | 8.9E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1579 | 1768 | 5.8E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1248 | 1576 | 1.2E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 773 | 974 | 5.4E-14 | IPR032675 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_043815126.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC110621158 [Manihot esculenta] | 0 |
| TrEMBL | A0A2P2MRK2 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology