Basic Information
Locus ID:
nbisL1-mrna-22370
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002235F_pilon | 727685 | 730045 | - | nbisL1-mrna-22370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 72,586.86 Da | 42.13 | 87.65 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 68 | 4.1E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 359 | 625 | 7.3E-33 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 134 | 180 | 1.4E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 359 | 629 | 1.83E-49 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 227 | 2.23E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 191 | 2.3E-36 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 431 | 649 | 5.3E-40 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 325 | 430 | 5.9E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 192 | 231 | 1.5E-6 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 118 | 142 | 1.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 143 | 166 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 167 | 190 | 69.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 355 | 630 | 27.947878 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 629 | 663 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 338 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_011019962.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RLK [Populus euphratica] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N5J649 | Protein kinase domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_028695 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology