Basic Information
Locus ID:
nbisL1-mrna-22340
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000234F_pilon | 549111 | 551099 | + | nbisL1-mrna-22340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.88 | 73,358.04 Da | 40.18 | 91.28 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 362 | 630 | 4.08969E-98 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 32 | 259 | 7.01962E-85 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 32 | 257 | 4.7E-60 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 356 | 626 | 6.7E-53 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 30 | 262 | 2.61E-60 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 339 | 644 | 8.9E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 318 | 431 | 1.1E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 432 | 649 | 1.8E-64 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 28 | 260 | 3.3E-67 | - |
| SMART | SM00220 | serkin_6 | 356 | 627 | 1.6E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 356 | 636 | 39.792168 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 478 | 490 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 362 | 385 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021669714.1 | probable L-type lectin-domain containing receptor kinase S.7 [Hevea brasiliensis] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | B9S9R7 | Kinase, putative OS=Ricinus communis OX=3988 GN=RCOM_0521610 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology