Basic Information
Locus ID:
nbisL1-mrna-2234
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 18918613 | 18921351 | + | nbisL1-mrna-2234 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 51,486.13 Da | 42.02 | 71.68 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 114 | 391 | 3.11643E-92 | - |
| Pfam | PF00069 | Protein kinase domain | 111 | 386 | 7.5E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 82 | 388 | 3.83E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 194 | 411 | 7.7E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 67 | 193 | 3.1E-30 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 108 | 394 | 39.594292 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 114 | 146 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 237 | 249 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 451 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 48 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15080.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039067027.1 | probable serine/threonine-protein kinase PIX7 isoform X1 [Hibiscus syriacus] | 0 |
| Q9LFP7 | Serine/threonine-protein kinase PBL34 OS=Arabidopsis thaliana OX=3702 GN=PBL34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A3BNS5 | Putative receptor-like protein kinase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110017pilonHSYRG00194 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology