Basic Information
Locus ID:
nbisL1-mrna-2234
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000017F_pilon | 7974861 | 7977161 | - | nbisL1-mrna-2234 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 86,115.38 Da | 39.07 | 65.41 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 67 | 120 | 9.30186E-19 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 67 | 128 | 1.6E-18 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 482 | 689 | 9.8E-75 | IPR024593 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 60 | 127 | 1.15E-21 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 55 | 150 | 1.6E-21 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 66 | 123 | 1.7E-18 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 67 | 131 | 16.447283 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 108 | 127 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 87 | 102 | 1.7E-9 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 103 | 123 | 1.7E-9 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 69 | 87 | 1.7E-9 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 262 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 743 | 766 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 750 | 766 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_012090104.1 | uncharacterized protein LOC105648353 [Jatropha curcas] | 0 |
| B3WEQ6 | Chaperone protein DnaJ OS=Lacticaseibacillus casei (strain BL23) OX=543734 GN=dnaJ PE=3 SV=1 | 0 | |
| TrEMBL | B9RIK9 | Heat shock protein binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1580150 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology