Basic Information
Locus ID:
nbisL1-mrna-2232
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 1751324 | 1757766 | - | nbisL1-mrna-2232 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 145,557.31 Da | 47.91 | 75.30 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 182 | 277 | 1.17854E-42 | - |
| CDD | cd13999 | STKc_MAP3K-like | 1039 | 1296 | 3.41029E-110 | - |
| Pfam | PF00564 | PB1 domain | 195 | 278 | 7.5E-20 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1035 | 1296 | 1.4E-61 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 195 | 284 | 4.21E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1025 | 1295 | 4.16E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1026 | 1120 | 2.2E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 197 | 279 | 6.1E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1121 | 1317 | 4.0E-53 | - |
| SMART | SM00220 | serkin_6 | 1033 | 1299 | 4.0E-62 | IPR000719 |
| SMART | SM00666 | PB1_new | 193 | 279 | 2.9E-31 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1033 | 1298 | 41.70026 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1158 | 1170 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1039 | 1064 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1115 | 1128 | 4.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1223 | 1245 | 4.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1267 | 1289 | 4.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1152 | 1170 | 4.4E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 391 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_011018312.1 | PREDICTED: uncharacterized protein LOC105121394 [Populus euphratica] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M006 | Uncharacterized protein LOC105121394 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology