Basic Information
Locus ID:
nbisL1-mrna-22317
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Calcineurin B-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 861152 | 864150 | + | nbisL1-mrna-22317 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.76 | 24,816.22 Da | 52.74 | 96.64 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00036 | EF hand | 77 | 101 | 3.7E-6 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 111 | 180 | 6.6E-11 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 23 | 205 | 9.02E-43 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 22 | 214 | 3.8E-64 | - |
| SMART | SM00054 | efh_1 | 156 | 184 | 9.2 | IPR002048 |
| SMART | SM00054 | efh_1 | 75 | 103 | 0.14 | IPR002048 |
| SMART | SM00054 | efh_1 | 112 | 140 | 0.34 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 108 | 143 | 13.034948 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 71 | 106 | 12.449146 | IPR002048 |
| PRINTS | PR00450 | Recoverin family signature | 79 | 100 | 1.0E-11 | - |
| PRINTS | PR00450 | Recoverin family signature | 17 | 31 | 1.0E-11 | - |
| PRINTS | PR00450 | Recoverin family signature | 172 | 192 | 1.0E-11 | - |
| PRINTS | PR00450 | Recoverin family signature | 126 | 144 | 1.0E-11 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04370 (VEGF signaling pathway)
map04370 (VEGF signaling pathway)
map04650 (Natural killer cell mediated cytotoxicity)
map04658 (Th1 and Th2 cell differentiation)
map04659 (Th17 cell differentiation)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64480.1 | calcineurin B-like protein 8. calcineurin B-like protein 8, member of plant-specific family of calcium sensor proteins containing 3 EF-hand motifs | 0 |
| RefSeq | XP_021603596.1 | calcineurin B-like protein 8 isoform X1 [Manihot esculenta] | 0 |
| Q9FUQ7 | Calcineurin B-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=CBL8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9W9U0 | Calcineurin B-like protein OS=Manihot esculenta OX=3983 GN=CBL8 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology