Basic Information
Locus ID:
nbisL1-mrna-223
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001172F_pilon | 1289037 | 1297577 | - | nbisL1-mrna-223 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 166,013.13 Da | 47.14 | 99.40 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52058 | L domain-like | 7 | 262 | 2.21E-8 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 522 | 884 | 3.06E-12 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 206 | 448 | 3.88E-11 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 785 | 1080 | 2.16E-12 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 378 | 647 | 1.18E-17 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1126 | 1375 | 2.92E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 270 | 2.4E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 661 | 932 | 8.6E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1205 | 1382 | 1.3E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 933 | 1099 | 1.8E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 464 | 660 | 1.2E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 275 | 456 | 1.3E-12 | IPR032675 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021674422.1 | - | 0 |
| TrEMBL | A0A2P2MRK2 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology