Basic Information
Locus ID:
nbisL1-mrna-22296
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Monogalactosyldiacylglycerol synthase 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002235F_pilon | 315422 | 318496 | + | nbisL1-mrna-22296 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 52,327.86 Da | 35.31 | 87.69 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17507 | GT28_Beta-DGS-like | 71 | 446 | 4.4636E-136 | - |
| Pfam | PF04101 | Glycosyltransferase family 28 C-terminal domain | 309 | 405 | 3.4E-10 | IPR007235 |
| Pfam | PF06925 | Monogalactosyldiacylglycerol (MGDG) synthase | 82 | 250 | 1.6E-61 | IPR009695 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 70 | 446 | 6.68E-25 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 258 | 431 | 2.3E-28 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20410.1 | monogalactosyldiacylglycerol synthase 2. Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation. | 0 |
| RefSeq | XP_002530758.2 | monogalactosyldiacylglycerol synthase 2, chloroplastic [Ricinus communis] | 0 |
| O82730 | Monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MGD2 PE=1 SV=1 | 0 | |
| TrEMBL | B9SXN9 | monogalactosyldiacylglycerol synthase OS=Ricinus communis OX=3988 GN=RCOM_0003390 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology