Basic Information
Locus ID:
nbisL1-mrna-22268
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000234F_pilon | 112008 | 115356 | - | nbisL1-mrna-22268 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 26,733.56 Da | 54.60 | 80.66 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05184 | Saposin-like type B, region 1 | 29 | 58 | 1.8E-9 | IPR007856 |
| Pfam | PF00069 | Protein kinase domain | 133 | 211 | 1.6E-8 | IPR000719 |
| Pfam | PF00026 | Eukaryotic aspartyl protease | 59 | 105 | 9.1E-5 | IPR033121 |
| SUPERFAMILY | SSF47862 | Saposin | 27 | 96 | 2.49E-9 | IPR011001 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 132 | 211 | 8.93E-14 | IPR011009 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 12 | 114 | 2.8E-8 | IPR021109 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 121 | 208 | 9.2E-11 | - |
| ProSiteProfiles | PS50015 | Saposin B type domain profile. | 26 | 73 | 9.4084 | IPR008139 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 129 | 244 | 8.923514 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 135 | 158 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11910.1 | aspartic proteinase A1. Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8). | 0 |
| RefSeq | XP_021692259.1 | aspartic proteinase-like [Hevea brasiliensis] | 0 |
| O04057 | Aspartic proteinase OS=Cucurbita pepo OX=3663 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2JHJ1 | Aspartic protease family protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg38318 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg25822 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000010767 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G004750 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.3149.V1.1 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-5128 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_049989 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G098300 |
| Poaceae | Triticum aestivum | 1 | TraesCS3B02G269300.1 |
| Poaceae | Zea mays | 19 | Zm00001eb046200_P001, Zm00001eb056740_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-56591 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g09600 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-22268 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9719 |
| Zosteraceae | Zostera marina | 1 | Zosma04g06120.v3.1 |