Basic Information
Locus ID:
nbisL1-mrna-22167
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 17228104 | 17234119 | + | nbisL1-mrna-22167 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 140,414.44 Da | 41.20 | 75.78 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 165 | 261 | 3.12919E-41 | - |
| CDD | cd13999 | STKc_MAP3K-like | 1004 | 1249 | 8.67743E-109 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 999 | 1249 | 6.1E-58 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 178 | 262 | 5.9E-16 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 177 | 265 | 1.83E-18 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 983 | 1249 | 1.28E-76 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 180 | 263 | 1.1E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 985 | 1084 | 2.6E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1085 | 1267 | 4.8E-51 | - |
| SMART | SM00666 | PB1_new | 176 | 263 | 1.3E-28 | IPR000270 |
| SMART | SM00220 | serkin_6 | 998 | 1251 | 2.3E-53 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 998 | 1251 | 37.742741 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1123 | 1135 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1004 | 1025 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1117 | 1135 | 6.8E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1080 | 1093 | 6.8E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1220 | 1242 | 6.8E-10 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021639805.1 | uncharacterized protein LOC110634958 [Hevea brasiliensis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JWA4 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology