Basic Information
Locus ID:
nbisL1-mrna-22150
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 17050674 | 17062777 | - | nbisL1-mrna-22150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 114,208.05 Da | 31.83 | 92.64 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 706 | 971 | 2.53703E-95 | - |
| Pfam | PF11721 | Malectin domain | 437 | 623 | 4.2E-48 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 704 | 970 | 2.2E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 683 | 971 | 6.97E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 125 | 408 | 6.46E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 983 | 9.5E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 94 | 214 | 1.1E-23 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 677 | 775 | 3.5E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 215 | 291 | 8.5E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 292 | 408 | 9.7E-22 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 436 | 627 | 5.1E-38 | - |
| SMART | SM00220 | serkin_6 | 700 | 971 | 2.6E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 700 | 977 | 37.573132 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 820 | 832 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1009 | 1046 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1009 | 1032 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_021615709.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Manihot esculenta] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2C9VRR7 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_06G174700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology