Basic Information
Locus ID:
nbisL1-mrna-22135
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
(-)-alpha-pinene synthase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001749F_pilon | 989654 | 1012207 | - | nbisL1-mrna-22135 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 8,636.84 Da | 49.60 | 107.89 | -0.17 |
Protein Domain:
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29110.1 | Terpenoid cyclases/Protein prenyltransferases superfamily protein. | 0 |
| RefSeq | XP_037497671.1 | LOW QUALITY PROTEIN: alpha-copaene synthase [Jatropha curcas] | 0 |
| Q94JS8 | (E)-beta-farnesene synthase OS=Citrus junos OX=135197 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067KVJ6 | (-)-germacrene D synthase-like OS=Jatropha curcas OX=180498 GN=JCGZ_00780 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G2449 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-12345 |
| Rhizophoraceae | Rhizophora mangle | 6 | nbisL1-mrna-22134, nbisL1-mrna-22135, nbisL1-mrna-22804 ... |