Basic Information
Locus ID:
nbisL1-mrna-2212
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 18691944 | 18697615 | - | nbisL1-mrna-2212 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 58,733.78 Da | 49.87 | 78.75 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 350 | 406 | 1.8E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 340 | 408 | 8.37E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 332 | 409 | 7.3E-36 | IPR036576 |
| Gene3D | G3DSA:2.60.120.260 | - | 427 | 531 | 1.6E-8 | - |
| SMART | SM00774 | WRKY_cls | 348 | 407 | 3.0E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 343 | 408 | 38.377045 | IPR003657 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_039011291.1 | probable WRKY transcription factor 3 isoform X1 [Hibiscus syriacus] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A2ZSN5 | Putative WRKY transcription factor 58 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110783pilonHSYRG00306 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology