Basic Information
Locus ID:
nbisL1-mrna-2205
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Cytosolic domain of 10TM putative phosphate transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 20938403 | 20943662 | - | nbisL1-mrna-2205 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.37 | 77,672.59 Da | 46.44 | 109.85 | 0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 160 | 315 | 2.4E-29 | IPR027815 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 100 | 139 | 1.8E-9 | IPR032880 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 92 | 1.5E-17 | IPR032880 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 328 | 593 | 1.7E-71 | IPR003864 |
| Coils | Coil | Coil | 240 | 267 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01100.1 | hypothetical protein 1. unknown protein, has cDNAs and ESTs associated to it | 0 |
| RefSeq | XP_043809905.1 | - | 0 |
| Q8GUH7 | CSC1-like protein HYP1 OS=Arabidopsis thaliana OX=3702 GN=HYP1 PE=1 SV=1 | 0 | |
| TrEMBL | B9SVJ7 | CSC1-like protein HYP1 OS=Ricinus communis OX=3988 GN=RCOM_0538000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology