Basic Information
Locus ID:
nbisL1-mrna-22013
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
DnaJ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 9230140 | 9231135 | - | nbisL1-mrna-22013 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.11 | 37,543.26 Da | 51.22 | 70.21 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15489 | PHD_SF | 179 | 227 | 0.00376812 | - |
| CDD | cd06257 | DnaJ | 68 | 121 | 1.62587E-18 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 68 | 129 | 6.8E-19 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 61 | 131 | 1.96E-19 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 54 | 143 | 5.5E-20 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 67 | 124 | 1.3E-19 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 68 | 132 | 15.291011 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 109 | 128 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 104 | 124 | 3.7E-10 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 70 | 88 | 3.7E-10 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 88 | 103 | 3.7E-10 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 167 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 167 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 296 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01710.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_021601873.2 | uncharacterized protein LOC110607111 [Manihot esculenta] | 0 |
| P48353 | Protein HLJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HLJ1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JYL0 | Uncharacterized protein MANES_02G145200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology