Basic Information
Locus ID:
nbisL1-mrna-22006
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 9067287 | 9068807 | - | nbisL1-mrna-22006 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.63 | 56,135.64 Da | 51.52 | 82.81 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 58 | 332 | 7.2E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 39 | 336 | 5.4E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 144 | 359 | 1.0E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 17 | 143 | 8.1E-25 | - |
| SMART | SM00220 | serkin_6 | 56 | 338 | 1.2E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 56 | 338 | 34.294044 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 62 | 86 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 187 | 199 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28390.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021638837.1 | serine/threonine-protein kinase-like protein At1g28390 [Hevea brasiliensis] | 0 |
| Q9SGN7 | Serine/threonine-protein kinase-like protein At1g28390 OS=Arabidopsis thaliana OX=3702 GN=At1g28390 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2PLX4 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology