Basic Information
Locus ID:
nbisL1-mrna-21987
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 15150571 | 15153057 | - | nbisL1-mrna-21987 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.61 | 21,077.88 Da | 57.15 | 90.11 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1 | 132 | 3.2E-29 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 152 | 3.1E-48 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 184 | 1.8E-49 | - |
| SMART | SM00220 | serkin_6 | 2 | 185 | 2.6E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 185 | 27.269445 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 52 | 64 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27300.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_052177935.1 | - | 0 |
| O81833 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana OX=3702 GN=SD11 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B6Z6M0 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah017725 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg25971 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000012040, gene:ENSEOMG00000033327 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr26G016300 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-21987, nbisL1-mrna-23878 |