Basic Information
Locus ID:
nbisL1-mrna-21917
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 5772110 | 5774602 | - | nbisL1-mrna-21917 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 37,715.60 Da | 45.87 | 76.87 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 44 | 201 | 5.7E-33 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 32 | 332 | 1.75E-52 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 34 | 117 | 5.1E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 118 | 335 | 5.8E-39 | - |
| SMART | SM00220 | serkin_6 | 41 | 334 | 6.6E-29 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 4 | 335 | 4.0E-19 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 41 | 334 | 31.156296 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 153 | 165 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 47 | 68 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 299 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61490.3 | - | 0 |
| RefSeq | XP_021648894.1 | probable serine/threonine-protein kinase PBL21 [Hevea brasiliensis] | 0 |
| O64770 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61490 OS=Arabidopsis thaliana OX=3702 GN=At1g61490 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6A6N385 | Protein kinase domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_028368 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.44290.3 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-21917 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-16415 |