Basic Information
Locus ID:
nbisL1-mrna-21873
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Inactive protein kinase SELMODRAFT_444075-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000226F_pilon | 1374427 | 1379461 | - | nbisL1-mrna-21873 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.54 | 60,180.97 Da | 43.43 | 77.03 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 390 | 470 | 3.88E-14 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 376 | 447 | 2.2E-11 | - |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 453 | 465 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 221 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 521 | 543 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13690.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_034895266.1 | inactive protein kinase SELMODRAFT_444075-like [Populus alba] | 0 |
| P0DH62 | Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii OX=88036 GN=SELMODRAFT_444075 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2J915 | Inactive protein kinase SELMODRAFT_444075-like isoform X1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg22820 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22611 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah023882 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g013230 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg39502, Sbi_jg54832 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg14829 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00016953 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl12862, Sgl18103, Sgl18104 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000033227 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0019780, CQ.Regalona.r1.1BG0005010 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30045930 |
| Apiaceae | Apium graveolens | 2 | Ag4G02777, Ag4G02778 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G11765 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G1670 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G1793 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno06g00380 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG03.2586, evm.TU.LG06.513 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00026811 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G07656 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG04.1195, evm.TU.LG05.1732 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_7_RagTag.518 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-19108 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-15586, nbisL1-mrna-9818 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-12978, nbisL1-mrna-21873 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000002l.528 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00011556 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-5835 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-12456 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132627937 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107018003 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_1201 |
| Tamaricaceae | Tamarix chinensis | 1 | TC04G2332 |