halophFGD

Basic Information

Locus ID: nbisL1-mrna-21842

Species & Taxonomic ID: Ceriops zippeliana & 413951

Genome Assembly: GCA_037897445.1

Description: Protein kinase superfamily protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
000226F_pilon	990616	1001865	+	nbisL1-mrna-21842

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.08	55,984.53 Da	54.11	72.18	-0.61

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	140	179	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	140	164	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT1G45160.1	Protein kinase superfamily protein.
RefSeq	XP_052306689.1	probable serine/threonine protein kinase IRE4 isoform X4 [Populus trichocarpa]
Swiss-Prot	F4HPN2	Probable serine/threonine protein kinase IRE4 OS=Arabidopsis thaliana OX=3702 GN=IRE4 PE=2 SV=1
TrEMBL	A0A2P2JRE8	Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg11895, jg13416, jg14090, jg2403, jg27090
Aizoaceae	Mesembryanthemum crystallinum	2	gene_11329, gene_3126
Amaranthaceae	Atriplex hortensis	2	Ah016226, Ah019186
Amaranthaceae	Beta vulgaris	1	BVRB_3g055890
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg15360, Sbi_jg40659, Sbi_jg50667, Sbi_jg56178
Amaranthaceae	Salicornia europaea	2	Seu_jg2220, Seu_jg26649
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00019219, GOSA_00020260, GOSA_00020261
Amaranthaceae	Suaeda glauca	7	Sgl02161, Sgl07321, Sgl44513, Sgl44514, Sgl49280, Sgl64025 ... Sgl68496
Amaranthaceae	Chenopodium album	4	gene:ENSEOMG00000009334, gene:ENSEOMG00000028581 ... gene:ENSEOMG00000035037, gene:ENSEOMG00000046123
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.3AG0000780, CQ.Regalona.r1.3BG0000820 ... CQ.Regalona.r1.8AG0010470, CQ.Regalona.r1.8BG0012620
Anacardiaceae	Pistacia vera	3	pistato.v30046270, pistato.v30148980, pistato.v30181260
Apiaceae	Apium graveolens	4	Ag2G02617, Ag3G00187, Ag3G01055, Ag7G02027
Arecaceae	Cocos nucifera	4	COCNU_01G003300, COCNU_06G009490, COCNU_14G006280 ... scaffold003371G000050
Arecaceae	Phoenix dactylifera	5	gene-LOC103695655, gene-LOC103713940, gene-LOC103714641 ... gene-LOC103716283, gene-LOC103721249
Asparagaceae	Asparagus officinalis	5	AsparagusV1_03.1551.V1.1, AsparagusV1_03.2398.V1.1 ... AsparagusV1_07.3585.V1.1, AsparagusV1_08.1150.V1.1, AsparagusV1_08.1151.V1.1
Asteraceae	Flaveria trinervia	5	Ftri16G05803, Ftri17G13264, Ftri18G30888, Ftri8G24984 ... Ftri9G07824
Brassicaceae	Arabidopsis thaliana	4	AT1G45160.2, AT1G48490.1, AT3G17850.1, AT5G62310.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10003543m.g.v1.0, Thhalv10011190m.g.v1.0 ... Thhalv10011200m.g.v1.0, Thhalv10019909m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp1g33960.v2.2, Sp1g35440.v2.2, Sp2g25500.v2.2 ... Sp3g15970.v2.2
Brassicaceae	Brassica nigra	6	BniB01g046940.2N, BniB04g062320.2N, BniB06g010570.2N ... BniB07g007420.2N, BniB07g009940.2N, BniB07g052330.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G2001, Ceq03G1616, Ceq03G2806
Casuarinaceae	Casuarina glauca	3	Cgl02G2077, Cgl03G1742, Cgl03G2960
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno08g02250, gene.Cymno11g08390, gene.Cymno14g06440
Dunaliellaceae	Dunaliella salina	1	Dusal.0055s00027.v1.0
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate04g07170, gene.Thate05g16720, gene.Thate08g15560 ... gene.Thate09g21410
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-1312
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG01.2297, evm.TU.LG06.554, evm.TU.LG10.47
Plantaginaceae	Plantago ovata	3	Pov_00012476, Pov_00019977, Pov_00026733
Plumbaginaceae	Limonium bicolor	6	Lb1G04450, Lb1G07369, Lb2G09477, Lb3G16647, Lb4G22592 ... Lb6G32390
Poaceae	Echinochloa crus-galli	5	AH01.850, BH01.993, BH05.4209, CH01.1037, CH05.4434
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_3AG0219040, gene-QOZ80_3BG0264280 ... gene-QOZ80_5AG0398560, gene-QOZ80_5BG0447150
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.4HG0337140.1, HORVU.MOREX.r3.5HG0425520.1
Poaceae	Lolium multiflorum	4	gene-QYE76_001088, gene-QYE76_001181, gene-QYE76_062436 ... gene-QYE76_062881
Poaceae	Oryza coarctata	4	Oco05G021670, Oco06G022440, Oco23G010790, Oco24G010600
Poaceae	Oryza sativa	2	LOC_Os03g50390.1, LOC_Os12g42660.1
Poaceae	Paspalum vaginatum	2	gene-BS78_01G106800, gene-BS78_08G154000
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0105038, Pt_Chr0704574, Pt_Chr0704937
Poaceae	Sporobolus alterniflorus	7	Chr01G007060, Chr04G019460, Chr04G026960, Chr06G020290 ... Chr07G025940, Chr07G025960, Chr12G030400
Poaceae	Thinopyrum elongatum	4	Tel4E01G082800, Tel5E01G064300, Tel7E01G1017800 ... Tel7E01G1018000
Poaceae	Triticum dicoccoides	4	gene_TRIDC4AG041780, gene_TRIDC4BG007260 ... gene_TRIDC5AG003820, gene_TRIDC5BG003940
Poaceae	Triticum aestivum	6	TraesCS4A02G267800.1, TraesCS4B02G046600.2 ... TraesCS4D02G045500.2, TraesCS5A02G025700.1, TraesCS5B02G025000.1, TraesCS5D02G033500.1
Poaceae	Zea mays	4	Zm00001eb054830_P004, Zm00001eb134490_P004 ... Zm00001eb216330_P001, Zm00001eb216350_P001
Poaceae	Zoysia japonica	4	nbis-gene-14823, nbis-gene-47463, nbis-gene-47464 ... nbis-gene-55722
Poaceae	Zoysia macrostachya	2	Zma_g26161, Zma_g645
Portulacaceae	Portulaca oleracea	5	evm.TU.LG03.2105, evm.TU.LG04.2560, evm.TU.LG08.67 ... evm.TU.LG11.1532, evm.TU.LG11.1533
Posidoniaceae	Posidonia oceanica	3	gene.Posoc05g05750, gene.Posoc06g18320, gene.Posoc08g00470
Rhizophoraceae	Bruguiera sexangula	5	evm.TU.Scaffold_11_RagTag.1280, evm.TU.Scaffold_4_RagTag.241 ... evm.TU.Scaffold_11_RagTag.755, evm.TU.Scaffold_4_RagTag.684, evm.TU.Scaffold_7_RagTag.564
Rhizophoraceae	Carallia pectinifolia	7	nbisL1-mrna-12590, nbisL1-mrna-14428, nbisL1-mrna-19064 ... nbisL1-mrna-22849, nbisL1-mrna-22866, nbisL1-mrna-28678, nbisL1-mrna-29110
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-1820, nbisL1-mrna-3255, nbisL1-mrna-6865
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-1683, nbisL1-mrna-2055, nbisL1-mrna-21842
Rhizophoraceae	Kandelia candel	5	evm.TU.utg000002l.558, evm.TU.utg000002l.559 ... evm.TU.utg000008l.152, evm.TU.utg000008l.439, evm.TU.utg000010l.317
Rhizophoraceae	Kandelia obovata	4	Maker00000108, Maker00000882, Maker00008935, Maker00012042
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-14465, nbisL1-mrna-2426, nbisL1-mrna-5864
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-12497, nbisL1-mrna-1646, nbisL1-mrna-6175
Salicaceae	Populus euphratica	9	populus_peu02285, populus_peu28223, populus_peu29131 ... populus_peu29147, populus_peu29148, populus_peu29688, populus_peu30510, populus_peu30706, populus_peu30707
Solanaceae	Lycium barbarum	4	gene-LOC132599703, gene-LOC132627994, gene-LOC132631746 ... gene-LOC132633182
Solanaceae	Solanum chilense	4	SOLCI000573700, SOLCI001211100, SOLCI001545600 ... SOLCI002608300
Solanaceae	Solanum pennellii	4	gene-LOC107014531, gene-LOC107015508, gene-LOC107018194 ... gene-LOC107023064
Tamaricaceae	Reaumuria soongarica	4	gene_12667, gene_1947, gene_4102, gene_471
Tamaricaceae	Tamarix chinensis	4	TC04G2243, TC05G0255, TC05G0913, TC06G1466
Zosteraceae	Zostera marina	3	Zosma03g35590.v3.1, Zosma05g00840.v3.1, Zosma05g24440.v3.1