Basic Information
Locus ID:
nbisL1-mrna-21832
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Myb/SANT-like DNA-binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 4094128 | 4095609 | - | nbisL1-mrna-21832 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 56,673.21 Da | 58.74 | 55.01 | -1.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13837 | Myb/SANT-like DNA-binding domain | 113 | 239 | 9.8E-22 | IPR044822 |
| Gene3D | G3DSA:1.10.10.60 | - | 116 | 190 | 3.6E-13 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 334 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 473 | 493 | - | - |
| Coils | Coil | Coil | 405 | 425 | - | - |
| Coils | Coil | Coil | 433 | 455 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10040.1 | sequence-specific DNA binding transcription factors. | 0 |
| RefSeq | XP_021686057.1 | uncharacterized protein LOC110668938 [Hevea brasiliensis] | 0 |
| TrEMBL | A0A6A6KLH4 | Myb_DNA-bind_4 domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_038683 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology