Basic Information
Locus ID:
nbisL1-mrna-21800
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
L-threonine ammonia-lyase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000560F_pilon | 805030 | 827494 | + | nbisL1-mrna-21800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 18,970.53 Da | 56.35 | 72.84 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 139 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_019251099.1 | PREDICTED: uncharacterized protein LOC109230015 [Nicotiana attenuata] | 0 |
| TrEMBL | A0A2I0ACW6 | RNA-directed DNA polymerase like OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash010086 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 38 | Sbi_jg11007, Sbi_jg11359, Sbi_jg11360, Sbi_jg13582 ... |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg15426, Seu_jg18148 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno02g06310 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_16_RagTag.678, evm.TU.Scaffold_3_RagTag.1025 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-21800 |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1437 |