Basic Information
Locus ID:
nbisL1-mrna-21774
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001414F_pilon | 1154124 | 1158174 | - | nbisL1-mrna-21774 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 81,035.57 Da | 37.60 | 104.08 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 491 | 550 | 1.1E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 76 | 2.5E-4 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 467 | 489 | 0.22 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 250 | 272 | 1.3 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 345 | 403 | 2.2E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 368 | 627 | 7.99E-53 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 84 | 419 | 5.1E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 671 | 738 | 6.2E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 189 | 5.0E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 292 | 369 | 1.2E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 291 | 2.6E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 370 | 634 | 3.5E-77 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 296 | 319 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 344 | 368 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 248 | 272 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 513 | 537 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 561 | 585 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 369 | 391 | 300.0 | IPR003591 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 371 | 384 | 8.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 465 | 478 | 8.5E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20270.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. | 0 |
| RefSeq | XP_034921811.1 | - | 0 |
| O65440 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3 | 0 | |
| TrEMBL | A0A835TDS9 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology