Basic Information
Locus ID:
nbisL1-mrna-21766
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000560F_pilon | 271809 | 275143 | + | nbisL1-mrna-21766 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 41,272.55 Da | 36.81 | 88.26 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 46 | 313 | 2.70299E-105 | - |
| Pfam | PF00069 | Protein kinase domain | 41 | 308 | 2.7E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 22 | 311 | 6.01E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 115 | 5.2E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 116 | 327 | 3.0E-62 | - |
| SMART | SM00220 | serkin_6 | 40 | 311 | 1.6E-28 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 10 | 322 | 1.3E-35 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 327 | 36.951237 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 162 | 174 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 46 | 68 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 367 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034926781.1 | PTI1-like tyrosine-protein kinase At3g15890 [Populus alba] | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9UYV5 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_11G057300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology