Basic Information
Locus ID:
nbisL1-mrna-21685
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 10974344 | 10980974 | + | nbisL1-mrna-21685 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 76,515.73 Da | 43.35 | 74.59 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 140 | 221 | 3.00827E-15 | - |
| CDD | cd05793 | S1_IF1A | 566 | 642 | 1.85665E-41 | IPR001253 |
| Pfam | PF00651 | BTB/POZ domain | 139 | 236 | 1.4E-14 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 261 | 353 | 8.6E-10 | IPR011705 |
| Pfam | PF01176 | Translation initiation factor 1A / IF-1 | 565 | 626 | 3.8E-19 | IPR006196 |
| SUPERFAMILY | SSF54695 | POZ domain | 147 | 235 | 7.53E-13 | IPR011333 |
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 535 | 674 | 5.43E-42 | IPR012340 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 133 | 274 | 5.4E-18 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 275 | 376 | 3.3E-14 | - |
| Gene3D | G3DSA:2.40.50.140 | - | 535 | 678 | 3.8E-54 | - |
| SMART | SM00225 | BTB_4 | 114 | 238 | 8.9E-8 | IPR000210 |
| SMART | SM00875 | BACK_2 | 253 | 355 | 4.1E-9 | IPR011705 |
| SMART | SM00652 | eIF1neu4 | 561 | 643 | 4.8E-47 | IPR001253 |
| TIGRFAM | TIGR00523 | eIF-1A: translation initiation factor eIF-1A | 547 | 643 | 2.1E-33 | IPR001253 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 135 | 207 | 12.164062 | IPR000210 |
| ProSiteProfiles | PS50832 | S1 domain IF1 type profile. | 555 | 629 | 30.791708 | IPR006196 |
| ProSitePatterns | PS01262 | Eukaryotic initiation factor 1A signature. | 574 | 596 | - | IPR018104 |
| Hamap | MF_00216 | Translation initiation factor 1A [eif1a]. | 549 | 643 | 18.426128 | IPR001253 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 535 | 556 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_021653309.1 | BTB/POZ domain-containing protein POB1 [Hevea brasiliensis] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2L931 | Uncharacterized protein MANES_01G250200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology