Basic Information
Locus ID:
nbisL1-mrna-21682
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 10898715 | 10904771 | + | nbisL1-mrna-21682 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.61 | 15,481.26 Da | 27.14 | 105.45 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | Coil | Coil | 98 | 132 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32250.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006382079.1 | - | 0 |
| Q8RWX4 | Protein KINASE OF THE OUTER CHLOROPLAST MEMBRANE 1 OS=Arabidopsis thaliana OX=3702 GN=KOC1 PE=1 SV=1 | 0 | |
| TrEMBL | B9HAF5 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30245480 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G600300 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC1AG030540, gene_TRIDC2AG079830 ... |
| Poaceae | Triticum aestivum | 1 | TraesCS1A02G201500.1 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-21682 |