Basic Information
Locus ID:
nbisL1-mrna-21619
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000144F_pilon | 575740 | 582125 | + | nbisL1-mrna-21619 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.14 | 50,681.35 Da | 41.73 | 83.69 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 181 | 449 | 4.3E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 157 | 449 | 7.11E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 143 | 252 | 8.3E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 253 | 453 | 2.3E-46 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 177 | 453 | 33.71455 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 183 | 206 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 75 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_021688642.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X2 [Hevea brasiliensis] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A836J1U8 | Protein STRUBBELIG-RECEPTOR FAMILY OS=Salix suchowensis OX=1278906 GN=IMY05_004G0024300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology