Basic Information
Locus ID:
nbisL1-mrna-21602
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 7678164 | 7681586 | - | nbisL1-mrna-21602 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 123,506.51 Da | 33.06 | 101.74 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 867 | 1135 | 5.3747E-87 | - |
| Pfam | PF00069 | Protein kinase domain | 864 | 1061 | 7.5E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 78 | 2.6E-10 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 672 | 693 | 0.7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 172 | 230 | 8.4E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 313 | 335 | 0.1 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 265 | 287 | 0.05 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 412 | 434 | 0.62 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 133 | 748 | 9.86E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 843 | 1132 | 3.24E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 240 | 1.6E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 354 | 494 | 6.6E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 937 | 1138 | 2.0E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 823 | 936 | 1.1E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 519 | 806 | 2.7E-47 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 241 | 353 | 3.0E-26 | IPR032675 |
| SMART | SM00220 | serkin_6 | 861 | 1135 | 9.9E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 621 | 644 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 669 | 693 | 9.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 169 | 192 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 311 | 334 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 263 | 287 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 145 | 168 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 216 | 29.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 861 | 1135 | 38.958263 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 981 | 993 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 867 | 889 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 669 | 682 | 8.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 314 | 327 | 8.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.1 | receptor-like protein kinase 2. | 0 |
| RefSeq | XP_002323902.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Populus trichocarpa] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M9E7 | Uncharacterized protein MANES_01G096300 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology