Basic Information
Locus ID:
nbisL1-mrna-2154
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 2672395 | 2675306 | + | nbisL1-mrna-2154 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 44,166.46 Da | 46.86 | 92.30 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 80 | 345 | 8.50063E-94 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 77 | 275 | 5.1E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 52 | 345 | 3.1E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 45 | 149 | 1.4E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 150 | 359 | 3.3E-58 | - |
| SMART | SM00220 | serkin_6 | 74 | 321 | 3.0E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 74 | 349 | 36.272804 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 80 | 102 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 196 | 208 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034928925.1 | putative serine/threonine-protein kinase [Populus alba] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1YYE9 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G221400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology