halophFGD

Basic Information

Locus ID: nbisL1-mrna-21483

Species & Taxonomic ID: Rhizophora mangle & 40031

Genome Assembly: GCA_037832345.1

Description: leucine-rich repeat receptor-like serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
002127F_pilon	561106	561983	+	nbisL1-mrna-21483

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.66	6,817.82 Da	59.84	113.83	0.14

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	13	58	5.4E-6	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	12	59	1.59E-12	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	2	60	2.4E-12	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	60	10.7468	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	42	54	-	IPR008271

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G15730.1	Protein kinase superfamily protein.
RefSeq	XP_010999425.1	PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730 isoform X3 [Populus euphratica]
Swiss-Prot	Q9LFV3	Calcium/calmodulin-regulated receptor-like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRLK2 PE=2 SV=1
TrEMBL	A0A2P2MWK8	-

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Chenopodium quinoa	3	CQ.Regalona.r1.2AG0004950, CQ.Regalona.r1.7AG0018440 ... CQ.Regalona.r1.9AG0008010
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-21483