Basic Information
Locus ID:
nbisL1-mrna-2148
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 20486671 | 20490439 | + | nbisL1-mrna-2148 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 74,332.93 Da | 42.86 | 73.92 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 474 | 580 | 3.1E-6 | IPR001245 |
| Pfam | PF12819 | Malectin-like domain | 55 | 431 | 1.4E-32 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 467 | 578 | 4.45E-19 | IPR011009 |
| Gene3D | G3DSA:2.60.120.430 | - | 52 | 221 | 1.0E-15 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 251 | 432 | 2.3E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 433 | 610 | 5.7E-29 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 473 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_021670698.1 | receptor-like protein kinase FERONIA [Hevea brasiliensis] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9WDU8 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_02G057300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Carallia pectinifolia | 7 | nbisL1-mrna-15250, nbisL1-mrna-15253, nbisL1-mrna-15254 ... |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-12685 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000011l.97 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-18379, nbisL1-mrna-21419 |