Basic Information
Locus ID:
nbisL1-mrna-21479
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
PAPA-1-like family protein zinc finger (HIT type) family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 8686923 | 8691796 | - | nbisL1-mrna-21479 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 47,547.94 Da | 55.35 | 59.72 | -1.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 388 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 343 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 270 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.2 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_021675821.1 | calponin homology domain-containing protein DDB_G0272472-like [Hevea brasiliensis] | 0 |
| TrEMBL | A0A2P2JCK5 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology