Basic Information
Locus ID:
nbisL1-mrna-21449
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
receptor-like protein kinase At5g15080
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 14434491 | 14434943 | - | nbisL1-mrna-21449 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.32 | 16,827.05 Da | 60.68 | 67.67 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 91 | 4.96E-6 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 93 | 3.1E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 112 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G28690.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_023921121.1 | probable serine/threonine-protein kinase PIX7 [Quercus suber] | 0 |
| Q9LFP7 | Serine/threonine-protein kinase PBL34 OS=Arabidopsis thaliana OX=3702 GN=PBL34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A837AX20 | Serine/threonine-protein kinase OS=Salix suchowensis OX=1278906 GN=IMY05_004G0098200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg40284 |
| Anacardiaceae | Pistacia vera | 5 | pistato.v30193930, pistato.v30194990, pistato.v30210420 ... |
| Plantaginaceae | Plantago ovata | 1 | Pov_00000346 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr18G015950 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-13540, nbis-gene-29654 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-21449 |