Basic Information
Locus ID:
nbisL1-mrna-21430
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000108F_pilon | 1189443 | 1194684 | - | nbisL1-mrna-21430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 86,133.20 Da | 41.34 | 80.77 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 116 | 311 | 2.37224E-96 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 129 | 289 | 2.9E-11 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 294 | 406 | 3.6E-30 | IPR001404 |
| Pfam | PF00183 | Hsp90 protein | 407 | 728 | 5.9E-129 | IPR001404 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 367 | 578 | 1.29E-69 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 601 | 721 | 7.32E-31 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 107 | 321 | 3.15E-60 | IPR036890 |
| Gene3D | G3DSA:3.30.565.10 | - | 105 | 333 | 1.8E-85 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 406 | 490 | 1.4E-34 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 491 | 577 | 2.2E-33 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 578 | 725 | 3.6E-47 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 366 | 405 | 2.1E-11 | - |
| PIRSF | PIRSF002583 | HSP90_HTPG | 407 | 756 | 2.3E-100 | IPR001404 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 84 | 407 | 3.8E-112 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 127 | 136 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 177 | 194 | 3.3E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 128 | 150 | 3.3E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 224 | 246 | 3.3E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 195 | 212 | 3.3E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 279 | 296 | 3.3E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 107 | 127 | 3.3E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 297 | 315 | 3.3E-64 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 107 | 722 | 22.63167 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 734 | 763 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07770.1 | HEAT SHOCK PROTEIN 89.1. | 0 |
| RefSeq | XP_021652594.1 | heat shock protein 90-6, mitochondrial [Hevea brasiliensis] | 0 |
| F4JFN3 | Heat shock protein 90-6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP90-6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KL09 | Heat shock protein 83 isoform X2 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology