Basic Information
Locus ID:
nbisL1-mrna-21422
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 13977574 | 13980996 | - | nbisL1-mrna-21422 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.06 | 124,013.99 Da | 38.05 | 99.95 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 867 | 1135 | 1.27507E-89 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 314 | 336 | 0.44 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 648 | 707 | 2.4E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 148 | 207 | 4.4E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 409 | 448 | 3.1E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 266 | 288 | 0.026 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 79 | 4.0E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 864 | 1060 | 2.9E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 843 | 1132 | 9.17E-74 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 138 | 477 | 2.04E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 373 | 736 | 1.02E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 937 | 1137 | 6.8E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 240 | 1.7E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 824 | 936 | 7.0E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 241 | 358 | 2.6E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 363 | 490 | 4.3E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 516 | 754 | 1.3E-50 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 312 | 336 | 4.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 694 | 718 | 77.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 670 | 693 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 21.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 861 | 1139 | 7.2E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 146 | 169 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 193 | 8.8 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 861 | 1140 | 39.184406 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 672 | 695 | 7.00349 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 867 | 889 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 981 | 993 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 670 | 683 | 6.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 438 | 451 | 6.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.1 | receptor-like protein kinase 2. | 0 |
| RefSeq | XP_021633344.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Manihot esculenta] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M9E5 | Uncharacterized protein MANES_01G096300 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology