Basic Information
Locus ID:
nbisL1-mrna-21401
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002191F_pilon | 336434 | 339675 | + | nbisL1-mrna-21401 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 41,416.55 Da | 36.77 | 86.44 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 46 | 313 | 3.14461E-102 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 42 | 310 | 2.7E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 22 | 311 | 3.28E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 116 | 329 | 1.2E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 12 | 115 | 3.7E-33 | - |
| SMART | SM00220 | serkin_6 | 40 | 311 | 4.2E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 319 | 36.074928 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 46 | 68 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 162 | 174 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 368 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15890.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034926781.1 | PTI1-like tyrosine-protein kinase At3g15890 [Populus alba] | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K2B0U7 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G032100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology