Basic Information
Locus ID:
nbisL1-mrna-21369
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
BAH and coiled-coil domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000108F_pilon | 886747 | 889054 | - | nbisL1-mrna-21369 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 22,131.94 Da | 42.79 | 62.14 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04714 | BAH_BAHCC1 | 22 | 134 | 1.4914E-56 | - |
| Pfam | PF01426 | BAH domain | 23 | 135 | 2.3E-22 | IPR001025 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 139 | 169 | 1.46E-5 | IPR011011 |
| Gene3D | G3DSA:2.30.30.490 | - | 1 | 137 | 5.4E-31 | IPR043151 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 138 | 181 | 5.4E-6 | IPR013083 |
| SMART | SM00439 | BAH_4 | 21 | 136 | 1.2E-39 | IPR001025 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 21 | 136 | 23.126047 | IPR001025 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22140.1 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein. | 0 |
| RefSeq | XP_037494131.1 | chromatin remodeling protein EBS isoform X2 [Jatropha curcas] | 0 |
| F4JL28 | Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1 | 0 | |
| TrEMBL | A0A5A7QS85 | PHD finger family protein / bromo-adjacenthomology (BAH) domain-containing protein OS=Striga asiatica OX=4170 GN=STAS_25387 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology