Basic Information
Locus ID:
nbisL1-mrna-21367
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the monovalent cation proton antiporter 1 (CPA1) transporter (TC 2.A.36) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 7890940 | 7898339 | - | nbisL1-mrna-21367 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 56,595.89 Da | 34.68 | 115.22 | 0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 30 | 424 | 1.4E-56 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 128 | 177 | 1.4E-14 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 98 | 112 | 3.0E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 84 | 95 | 3.0E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 113 | 121 | 3.0E-9 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27150.1 | Na+/H+ exchanger 1. Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development. | 0 |
| RefSeq | XP_021651474.1 | sodium/hydrogen exchanger 2-like [Hevea brasiliensis] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2KLD8 | Sodium/hydrogen exchanger OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology