Basic Information
Locus ID:
nbisL1-mrna-21348
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 7726942 | 7729432 | + | nbisL1-mrna-21348 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 44,331.66 Da | 42.80 | 107.05 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 201 | 215 | 0.25 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 157 | 176 | 0.0061 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 77 | 1.4E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 378 | 1.47E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 201 | 387 | 2.4E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 200 | 1.5E-35 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 203 | 224 | 7.018892 | IPR001611 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_012092328.1 | LRR receptor-like serine/threonine-protein kinase SIK1 [Jatropha curcas] | 0 |
| TrEMBL | A0A127AUF3 | LRR-RLK OS=Vernicia fordii OX=73154 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology