Basic Information
Locus ID:
nbisL1-mrna-21281
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002088F_pilon | 613708 | 616948 | + | nbisL1-mrna-21281 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 82,902.09 Da | 33.81 | 86.27 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 63 | 187 | 5.36284E-18 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 520 | 714 | 3.41253E-85 | - |
| Pfam | PF01453 | D-mannose binding lectin | 109 | 211 | 1.8E-22 | IPR001480 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 517 | 712 | 3.0E-46 | IPR001245 |
| Pfam | PF08276 | PAN-like domain | 345 | 383 | 5.1E-9 | IPR003609 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 488 | 717 | 1.35E-74 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 108 | 204 | 1.31E-17 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 590 | 724 | 7.5E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 487 | 589 | 1.2E-37 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 46 | 184 | 7.1E-14 | IPR036426 |
| SMART | SM00108 | blect_4 | 51 | 187 | 6.5E-11 | IPR001480 |
| SMART | SM00220 | serkin_6 | 514 | 727 | 3.5E-16 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 23 | 301 | 1.1E-35 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 302 | 731 | 7.6E-145 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 51 | 180 | 12.96496 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 514 | 731 | 37.544865 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 321 | 401 | 7.5292 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 635 | 647 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16030.1 | lectin protein kinase family protein. | 0 |
| RefSeq | XP_020535352.1 | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 [Jatropha curcas] | 0 |
| Q9LW83 | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana OX=3702 GN=CES101 PE=2 SV=2 | 0 | |
| TrEMBL | B9RQP9 | Receptor-like serine/threonine-protein kinase OS=Ricinus communis OX=3988 GN=RCOM_1494620 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah018508 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000044267 |
| Anacardiaceae | Pistacia vera | 6 | pistato.v30036830, pistato.v30036880, pistato.v30036890 ... |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G67520.1, AT3G16030.1 |
| Brassicaceae | Brassica nigra | 3 | BniB01g048880.2N, BniB03g025090.2N, BniB07g053710.2N |
| Plantaginaceae | Plantago ovata | 1 | Pov_00005846 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_18_RagTag.496 |
| Rhizophoraceae | Carallia pectinifolia | 8 | nbisL1-mrna-27876, nbisL1-mrna-27877, nbisL1-mrna-27878 ... |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-10731, nbisL1-mrna-10732 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-7927 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-19668 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-21281 |