Basic Information
Locus ID:
nbisL1-mrna-21271
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Short Name:
ATMRK1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 7150461 | 7152985 | + | nbisL1-mrna-21271 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 44,850.57 Da | 33.78 | 77.44 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 98 | 370 | 7.85637E-114 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 95 | 370 | 1.3E-58 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 76 | 370 | 1.13E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 81 | 173 | 3.8E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 196 | 381 | 5.5E-60 | - |
| SMART | SM00220 | serkin_6 | 92 | 373 | 6.0E-63 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 5 | 379 | 6.3E-55 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 92 | 373 | 41.45998 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 237 | 249 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 297 | 319 | 5.0E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 341 | 363 | 5.0E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 193 | 206 | 5.0E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 231 | 249 | 5.0E-16 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021653916.1 | serine/threonine-protein kinase HT1-like isoform X1 [Hevea brasiliensis] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2J5F5 | Uncharacterized protein MANES_05G078400 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology