Basic Information
Locus ID:
nbisL1-mrna-21245
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002088F_pilon | 388575 | 389077 | + | nbisL1-mrna-21245 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 12,412.88 Da | 42.39 | 85.61 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 114 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32600.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_002517522.2 | E3 ubiquitin-protein ligase At1g63170 [Ricinus communis] | 0 |
| TrEMBL | B9RUV3 | Ring finger protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0894780 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Oryza coarctata | 1 | Oco17G002670 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-28094 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-7313 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-21245 |