Basic Information
Locus ID:
nbisL1-mrna-21216
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 6631303 | 6633371 | - | nbisL1-mrna-21216 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 35,583.50 Da | 44.22 | 84.41 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 127 | 271 | 3.01E-7 | IPR011009 |
| SUPERFAMILY | SSF47226 | Histidine-containing phosphotransfer domain, HPT domain | 268 | 315 | 3.7E-6 | IPR036641 |
| Gene3D | G3DSA:1.20.120.160 | HPT domain | 262 | 315 | 4.6E-13 | IPR036641 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 123 | 174 | 1.1E-5 | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G02970.1 | WEE1 kinase homolog. Protein kinase that negatively regulates the entry into mitosis. | 0 |
| RefSeq | XP_034932497.1 | - | 0 |
| Q8L4H0 | Wee1-like protein kinase OS=Arabidopsis thaliana OX=3702 GN=WEE1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5Q3S8 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg37919, jg37920 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_5194 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah029928 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g164020 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg1415, Sbi_jg1416, Sbi_jg35156 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg3320, Seu_jg3321 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00003513, GOSA_00003514 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl73757, Sgl77263 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000006992, gene:ENSEOMG00000033542 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.7AG0013850 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30009580 |
| Apiaceae | Apium graveolens | 2 | Ag10G01837, Ag2G02540 |
| Arecaceae | Cocos nucifera | 1 | scaffold035457G000010 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103705828, gene-LOC120103898 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G22839 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G02970.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10007445m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g01960.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g001000.2N, BniB03g000300.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G0925 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl05G2424, Cgl06G0953 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g07450 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.1302s00002.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g20150 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG04.307, evm.TU.LG08.1309 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00008263 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G07581 |
| Poaceae | Echinochloa crus-galli | 4 | AH02.223, AH07.306, BH07.405, CH03.4512 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0100940, gene-QOZ80_2BG0154220 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0555240.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_020113 |
| Poaceae | Oryza coarctata | 2 | Oco03G001980, Oco04G001840 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g04240.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G030400 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0201444, Pt_Chr0201453 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr06G035220, Chr0G011580, Chr0G011900, Chr15G026580 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G225700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG012930, gene_TRIDC6BG018050 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G099900.1, TraesCS6B02G128100.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb209170_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-33781 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g12159 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.149, evm.TU.LG04.603 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g21490 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_9_RagTag.835 |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-21186, nbisL1-mrna-21216, nbisL1-mrna-21389 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-19951 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-18464 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000003l.573 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00009772 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-1550 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-5216 |
| Salicaceae | Populus euphratica | 2 | populus_peu27228, populus_peu31213 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132611032 |
| Solanaceae | Solanum chilense | 1 | SOLCI000203000 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107029703 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_9797 |
| Tamaricaceae | Tamarix chinensis | 1 | TC08G0610 |
| Zosteraceae | Zostera marina | 1 | Zosma05g03180.v3.1 |