Basic Information
Locus ID:
nbisL1-mrna-21165
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000235F_pilon | 719641 | 722307 | + | nbisL1-mrna-21165 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.13 | 97,943.86 Da | 33.42 | 101.33 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 177 | 198 | 0.84 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 491 | 550 | 1.2E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 708 | 878 | 9.0E-33 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 76 | 2.6E-5 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 467 | 489 | 0.24 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 250 | 272 | 1.7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 84 | 406 | 3.37E-65 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 313 | 646 | 2.38E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 700 | 878 | 3.37E-50 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 292 | 2.2E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 192 | 2.2E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 670 | 783 | 5.9E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 293 | 369 | 3.6E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 784 | 881 | 8.9E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 370 | 634 | 6.1E-76 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 561 | 585 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 175 | 199 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 489 | 513 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 344 | 368 | 28.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 706 | 885 | 1.9E-8 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 248 | 272 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 369 | 391 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 296 | 319 | 120.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 706 | 888 | 28.456701 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 828 | 840 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20270.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. | 0 |
| RefSeq | XP_011004295.1 | PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 isoform X2 [Populus euphratica] | 0 |
| O65440 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3 | 0 | |
| TrEMBL | A0A5N5P3H3 | Protein kinase domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_000510 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology