Basic Information
Locus ID:
nbisL1-mrna-21019
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000883F_pilon | 2441747 | 2454644 | + | nbisL1-mrna-21019 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 100,026.05 Da | 36.16 | 101.73 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 693 | 788 | 1.7E-12 | IPR000719 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 132 | 173 | 1.4E-7 | IPR025875 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 42 | 80 | 3.6E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 685 | 887 | 1.28E-31 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 88 | 435 | 5.41E-66 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 397 | 612 | 8.16E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 785 | 889 | 1.7E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 277 | 347 | 4.9E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 276 | 3.2E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 348 | 624 | 3.5E-65 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 189 | 1.5E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 675 | 778 | 3.6E-23 | - |
| SMART | SM00369 | LRR_typ_2 | 515 | 539 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 228 | 252 | 85.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 300 | 324 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 107 | 131 | 2.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 155 | 178 | 25.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 691 | 915 | 11.552439 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 697 | 727 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_021907621.1 | receptor-like protein kinase HSL1 [Carica papaya] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2IWX1 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology