Basic Information
Locus ID:
nbisL1-mrna-20996
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000883F_pilon | 2071812 | 2086559 | + | nbisL1-mrna-20996 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 357,189.16 Da | 47.28 | 101.92 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 61 | 172 | 1.6E-13 | IPR002182 |
| SUPERFAMILY | SSF52047 | RNI-like | 2675 | 2979 | 2.28E-11 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 2426 | 2796 | 6.12E-16 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 2 | 186 | 2.42E-18 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 1956 | 2167 | 1.1E-7 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1662 | 1881 | 4.0E-13 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 809 | 1027 | 4.32E-13 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 245 | 877 | 1.36E-29 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1110 | 1636 | 8.16E-11 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 2111 | 2355 | 3.06E-12 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1425 | 1641 | 1.26E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 225 | 590 | 1.3E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 89 | 174 | 3.4E-18 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2569 | 2810 | 3.2E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1917 | 2173 | 1.9E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 805 | 1052 | 2.7E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1320 | 1541 | 3.7E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1542 | 1896 | 2.2E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2819 | 3088 | 5.1E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 605 | 804 | 4.6E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2413 | 2568 | 1.6E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1062 | 1319 | 3.9E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2219 | 2412 | 5.3E-11 | IPR032675 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15890.2 | - | 0 |
| RefSeq | XP_017977190.1 | PREDICTED: uncharacterized protein LOC18599617 isoform X1 [Theobroma cacao] | 0 |
| Q9LMP6 | Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana OX=3702 GN=At1g15890 PE=3 SV=2 | 0 | |
| TrEMBL | A0A5C7GYH3 | AAA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_025506 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology