Basic Information
Locus ID:
nbisL1-mrna-20995
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000883F_pilon | 2061420 | 2071690 | + | nbisL1-mrna-20995 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 56,253.50 Da | 46.61 | 88.08 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 448 | 487 | 3.4E-6 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 428 | 484 | 1.76E-8 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 90 | 231 | 3.14E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 6 | 244 | 1.1E-10 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 427 | 491 | 3.3E-8 | IPR027417 |
| Coils | Coil | Coil | 320 | 347 | - | - |
| Coils | Coil | Coil | 359 | 379 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63020.1 | Disease resistance protein (CC-NBS-LRR class) family. | 0 |
| RefSeq | XP_037496112.1 | uncharacterized protein LOC119369116 isoform X1 [Jatropha curcas] | 0 |
| Q8RXS5 | Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana OX=3702 GN=At5g63020 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P2MMH8 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology